<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.3 20210610//EN" "JATS-journalpublishing1-3.dtd">
<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">microbe</journal-id><journal-title-group><journal-title xml:lang="ru">Проблемы особо опасных инфекций</journal-title><trans-title-group xml:lang="en"><trans-title>Problems of Particularly Dangerous Infections</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">0370-1069</issn><issn pub-type="epub">2658-719X</issn><publisher><publisher-name>Russian Research Anti-Plague Institute “Microbe”</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.21055/0370-1069-2020-2-31-37</article-id><article-id custom-type="elpub" pub-id-type="custom">microbe-1315</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ОБЗОРЫ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>REVIEWS</subject></subj-group></article-categories><title-group><article-title>Обзор эпизоотологической ситуации по высокопатогенному вирусу гриппа птиц в России в 2019 г.</article-title><trans-title-group xml:lang="en"><trans-title>Overview of the Epizootiological Situation on Highly Pathogenic Avian Influenza Virus in Russia in 2019</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Марченко</surname><given-names>В. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Marchenko</surname><given-names>V. Yu.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Марченко Василий Юрьевич</p><p>630559, Новосибирская обл., р.п. Кольцово</p></bio><bio xml:lang="en"><p>Vasily Yu. Marchenko</p><p>Kol’tsovo, Novosibirsk Region, 630559</p></bio><email xlink:type="simple">vector@vector.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Гончарова</surname><given-names>Н. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Goncharova</surname><given-names>N. I.</given-names></name></name-alternatives><bio xml:lang="ru"/><bio xml:lang="en"/><email xlink:type="simple">vector@vector.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Tran</surname><given-names>Thi Nhai</given-names></name><name name-style="western" xml:lang="en"><surname>Tran</surname><given-names>Thi Nhai</given-names></name></name-alternatives><bio xml:lang="ru"><p>Tran Thi Nhai</p><p>Ханой</p></bio><bio xml:lang="en"/><email xlink:type="simple">ropcenterhanoi@mail.ru</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Trinh</surname><given-names>Khac Sau</given-names></name><name name-style="western" xml:lang="en"><surname>Trinh</surname><given-names>Khac Sau</given-names></name></name-alternatives><bio xml:lang="ru"><p>Trinh Khac Sau</p><p>Ханой</p></bio><bio xml:lang="en"/><email xlink:type="simple">ropcenterhanoi@mail.ru</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Nguyen</surname><given-names>Ngoc Quyen</given-names></name><name name-style="western" xml:lang="en"><surname>Nguyen</surname><given-names>Ngoc Quyen</given-names></name></name-alternatives><bio xml:lang="ru"><p>Nguyen Ngoc Quyen</p><p>Винь</p></bio><bio xml:lang="en"/><email xlink:type="simple">hcthtyv3@gmail.com</email><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Гаврилова</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Gavrilova</surname><given-names>E. V.</given-names></name></name-alternatives><bio xml:lang="ru"/><bio xml:lang="en"/><email xlink:type="simple">vector@vector.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Максютов</surname><given-names>Р. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Maksyutov</surname><given-names>R. A.</given-names></name></name-alternatives><bio xml:lang="ru"/><bio xml:lang="en"/><email xlink:type="simple">vector@vector.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Рыжиков</surname><given-names>А. Б.</given-names></name><name name-style="western" xml:lang="en"><surname>Ryzhikov</surname><given-names>A. B.</given-names></name></name-alternatives><bio xml:lang="ru"/><bio xml:lang="en"/><email xlink:type="simple">vector@vector.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>ФБУН «Государственный научный центр вирусологии и биотехнологии «Вектор»</institution><country>Россия</country></aff><aff xml:lang="en"><institution>State Scientific Center of Virology and Biotechnology “Vector”</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru"><institution>Российско-Вьетнамский Тропический научно-исследовательский и технологический центр</institution><country>Вьетнам</country></aff><aff xml:lang="en"><institution>Russian-Vietnamese Tropical Research and Technology Center</institution><country>Viet Nam</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru"><institution>Региональное управление по охране здоровья животных № 3</institution><country>Вьетнам</country></aff><aff xml:lang="en"><institution>Regional Animal Health Office No 3</institution><country>Viet Nam</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2020</year></pub-date><pub-date pub-type="epub"><day>11</day><month>07</month><year>2020</year></pub-date><volume>0</volume><issue>2</issue><fpage>31</fpage><lpage>37</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Марченко В.Ю., Гончарова Н.И., Tran T.N., Trinh K.S., Nguyen N.Q., Гаврилова Е.В., Максютов Р.А., Рыжиков А.Б., 2020</copyright-statement><copyright-year>2020</copyright-year><copyright-holder xml:lang="ru">Марченко В.Ю., Гончарова Н.И., Tran T.N., Trinh K.S., Nguyen N.Q., Гаврилова Е.В., Максютов Р.А., Рыжиков А.Б.</copyright-holder><copyright-holder xml:lang="en">Marchenko V.Y., Goncharova N.I., Tran T.N., Trinh K.S., Nguyen N.Q., Gavrilova E.V., Maksyutov R.A., Ryzhikov A.B.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://journal.microbe.ru/jour/article/view/1315">https://journal.microbe.ru/jour/article/view/1315</self-uri><abstract><p>В данной статье рассмотрена современная ситуация по высокопатогенному вирусу гриппа птиц в 2019 г. и сделан прогноз возможного дальнейшего распространения вирусов на территории России. В 2019 г. в мире отмечена циркуляция различных вариантов вируса, имеющих важное эпизоотологическое и эпидемиологическое значение. Зарегистрированы вспышки среди диких и домашних птиц, а также случаи заражения человека вирусами гриппа подтипов A/H5Nx, A/H7N9 и A/H9N2. В России в 2019 г. зарегистрировано только две вспышки, вызванные высокопатогенным вариантом вируса гриппа A/H5N8. Обе вспышки зафиксированы в первой и второй половине января на птицефабрике в Ростовской области. Помимо этого, в ходе мониторинга вируса гриппа птиц на территории Томской области в мае 2019 г. от дикой птицы выделен штамм вируса гриппа A/H14N7. В июне на территории Камчатского края выделен штамм подтипа A/H13N2, затем в августе 2019 г. вирус гриппа подтипа A/H13N6 выделен на территории Саратовской области. Выявлено, что некоторые штаммы вируса гриппа, выделяемые в России, имеют высокую степень идентичности со штаммами, циркулирующими в Юго-Восточной Азии. Это показано на примере филогенетического анализа вирусов гриппа A/H5Nx, выделенных ранее на территории Саратовской области и Социалистической Республики Вьетнам. Таким образом, в очередной раз доказано, что территория России играет важную географическую роль в глобальном распространении вируса гриппа птиц. </p></abstract><trans-abstract xml:lang="en"><p>This review describes the current situation on highly pathogenic avian influenza virus in 2019 and predicts the possible further spread of avian influenza in Russia. In 2019 outbreaks were reported among wild birds and poultry, as well as human infections with influenza viruses of the subtypes H5Nx, H7N9 and H9N2 in several countries. In 2019, only two outbreaks of highly pathogenic avian influenza H5N8 in Russia occurred. Both outbreaks were recorded in January at poultry farm in the Rostov Region. In addition, in May 2019 avian influenza virus of H14N7 subtype was isolated from a wild bird during the avian influenza virus surveillance in Tomsk Region. In June 2019, a strain of H13N2 subtype was isolated in the territory of Kamchatka Region, then, in August 2019, an influenza virus of H13N6 subtype was isolated in the Saratov Region. It was revealed that some strains of avian influenza virus isolated in Russia have a high degree of identity with strains circulating in South-East Asia. This was shown by the phylogenetic analysis of A/ H5Nx influenza viruses previously isolated in the Saratov Region and the Socialist Republic of Vietnam during the avian influenza virus surveillance. Thus, it was demonstrated again that the territory of Russia plays a key geographical role in the global spread of avian influenza virus.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>вирус гриппа птиц</kwd><kwd>мониторинг</kwd><kwd>вспышки</kwd><kwd>H5N8</kwd><kwd>H14N7</kwd><kwd>H13Nx</kwd><kwd>Россия</kwd></kwd-group><kwd-group xml:lang="en"><kwd>Avian influenza virus</kwd><kwd>surveillance</kwd><kwd>outbreaks</kwd><kwd>H5N8</kwd><kwd>H14N7</kwd><kwd>H13Nx</kwd><kwd>Russia</kwd></kwd-group><funding-group><funding-statement xml:lang="ru">Исследование  проводилось  в  рамках  выполнения  государственного  задания  гз-4/16.  Филогенетический  анализ  проведен  в рамках  выполнения  распоряжения  правительства Российской Федерации от 13.07.2019 г. № 1536-р.</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Shaw M.L., Palese P. Orthomyxoviridae. In: Knipe D.M., Howley P.M., editors. Fields Virology. 6th ed. Philadelphia: Wolters Kluwer Health/Lippincott Williams &amp; Wilkins; 2013. P. 1151–85.</mixed-citation><mixed-citation xml:lang="en">Shaw M.L., Palese P. Orthomyxoviridae. In: Knipe D.M., Howley P.M., editors. Fields Virology. 6th ed. Philadelphia: Wolters Kluwer Health/Lippincott Williams &amp; Wilkins; 2013. P. 1151–85.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Manrubia S.C., Escarmis C., Domingo E., Lazaro E. High mutation rates, bottlenecks, and robustness of RNA viral quasispecies. Gene. 2005; 347:273–82.</mixed-citation><mixed-citation xml:lang="en">Manrubia S.C., Escarmis C., Domingo E., Lazaro E. High mutation rates, bottlenecks, and robustness of RNA viral quasispecies. Gene. 2005; 347:273–82.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Turner P.E. Searching for the advantages of virus sex. Orig. Life Evol. Biosph. 2003; 33:95–108. DOI: 10.1023/A:1023973015054.</mixed-citation><mixed-citation xml:lang="en">Turner P.E. Searching for the advantages of virus sex. Orig. Life Evol. Biosph. 2003; 33:95–108. DOI: 10.1023/A:1023973015054.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Kawaoka Y., Chambers T.M., Sladen W.L., Webster R.G. Is the gene pool of influenza viruses in shorebirds and gulls different from that in wild ducks? Virology. 1988; 163(1):247–50.</mixed-citation><mixed-citation xml:lang="en">Kawaoka Y., Chambers T.M., Sladen W.L., Webster R.G. Is the gene pool of influenza viruses in shorebirds and gulls different from that in wild ducks? Virology. 1988; 163(1):247–50.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Slemons R.D., Johnson D.C., Osborn J.S., Hayes F. Type-A influenza viruses isolated from wild free-flying ducks in California. Avian Diseases. 1974; 18(1):119–24. PMID: 4205344.</mixed-citation><mixed-citation xml:lang="en">Slemons R.D., Johnson D.C., Osborn J.S., Hayes F. Type-A influenza viruses isolated from wild free-flying ducks in California. Avian Diseases. 1974; 18(1):119–24. PMID: 4205344.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Suarez D.L. Evolution of avian influenza viruses. Vet. Microbiol. 2000; 74(1–2):15–27. DOI: 10.1016/s0378-1135(00)00161-9.</mixed-citation><mixed-citation xml:lang="en">Suarez D.L. Evolution of avian influenza viruses. Vet. Microbiol. 2000; 74(1–2):15–27. DOI: 10.1016/s0378-1135(00)00161-9.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Tong S., Li Y., Rivailler P., Conrardy C., Castillo D.A.A., Chen L.M., Recuenco S., Ellison J.A., Davis C.T., York I.A., Turmelle A.S., Moran D., Rogers S., Shi M., Tao Y., Weil M.R., Tang K., Rowe L.A., Sammons S., Xu X., Frace M., Lindblade K.A., Cox N.J., Anderson L.J., Rupprecht C.E., Donis R.O. A distinct lineage of influenza A virus from bats. Proc. Natl. Acad. Sci. U S A. 2012; 109(11):4269–74. DOI: 10.1073/pnas.1116200109.</mixed-citation><mixed-citation xml:lang="en">Tong S., Li Y., Rivailler P., Conrardy C., Castillo D.A.A., Chen L.M., Recuenco S., Ellison J.A., Davis C.T., York I.A., Turmelle A.S., Moran D., Rogers S., Shi M., Tao Y., Weil M.R., Tang K., Rowe L.A., Sammons S., Xu X., Frace M., Lindblade K.A., Cox N.J., Anderson L.J., Rupprecht C.E., Donis R.O. A distinct lineage of influenza A virus from bats. Proc. Natl. Acad. Sci. U S A. 2012; 109(11):4269–74. DOI: 10.1073/pnas.1116200109.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Tong S., Zhu X., Li Y., Shi M., Zhang J., Bourgeois M., Yang H., Chen X., Recuenco S., Gomez J., Chen L.-M., Johnson A., Tao Y., Dreyfus C., Yu W., McBride R., Carney P.J., Gilbert A.T., Chang J., Guo Z., Davis C.T., Paulson J.C., Stevens J., Rupprecht C.E., Holmes E.C., Wilson I.A., Donis R.O. New World bats harbor diverse influenza A viruses. PLoS Pathog. 2013; 9:e1003657. DOI: 10.1371/journal.ppat.1003657.</mixed-citation><mixed-citation xml:lang="en">Tong S., Zhu X., Li Y., Shi M., Zhang J., Bourgeois M., Yang H., Chen X., Recuenco S., Gomez J., Chen L.-M., Johnson A., Tao Y., Dreyfus C., Yu W., McBride R., Carney P.J., Gilbert A.T., Chang J., Guo Z., Davis C.T., Paulson J.C., Stevens J., Rupprecht C.E., Holmes E.C., Wilson I.A., Donis R.O. New World bats harbor diverse influenza A viruses. PLoS Pathog. 2013; 9:e1003657. DOI: 10.1371/journal.ppat.1003657.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Webster R.G., Bean W.J., Gorman O.T., Chambers T.M., Kawaoka Y. Evolution and ecology of influenza A viruses. Microbiol. Rev. 1992; 56(1):152–79. PMID: 1579108. PMCID: PMC372859.</mixed-citation><mixed-citation xml:lang="en">Webster R.G., Bean W.J., Gorman O.T., Chambers T.M., Kawaoka Y. Evolution and ecology of influenza A viruses. Microbiol. Rev. 1992; 56(1):152–79. PMID: 1579108. PMCID: PMC372859.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Olsen B., Munster V.J., Wallensten A., Waldenstrцm J., Osterhaus A.D.M.E., Fouchier R.A.M. Global patterns of influenza A virus in wild birds. Science. 2006; 312(5772):384–8. DOI: 10.1126/science.1122438.</mixed-citation><mixed-citation xml:lang="en">Olsen B., Munster V.J., Wallensten A., Waldenstrцm J., Osterhaus A.D.M.E., Fouchier R.A.M. Global patterns of influenza A virus in wild birds. Science. 2006; 312(5772):384–8. DOI: 10.1126/science.1122438.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Easterday B.C., Trainer D.O., Tůmová B., Pereira H.G. Evidence of infection with influenza viruses in migratory waterfowl. Nature. 1968; 219(5153):523–4. DOI: 10.1038/219523a0.</mixed-citation><mixed-citation xml:lang="en">Easterday B.C., Trainer D.O., Tůmová B., Pereira H.G. Evidence of infection with influenza viruses in migratory waterfowl. Nature. 1968; 219(5153):523–4. DOI: 10.1038/219523a0.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Kuiken T. Is low pathogenic avian influenza virus virulent for wild waterbirds? Proc. Biol. Sci. 2013; 280(1763):20130990. DOI: 10.1098/rspb.2013.0990.</mixed-citation><mixed-citation xml:lang="en">Kuiken T. Is low pathogenic avian influenza virus virulent for wild waterbirds? Proc. Biol. Sci. 2013; 280(1763):20130990. DOI: 10.1098/rspb.2013.0990.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Jourdain E., Gunnarsson G., Wahlgren J., Latorre-Margalef N., Brцjer C., Sahlin S., Svensson L., Waldenstrцm J., Lundkvist A., Olsen B. Influenza virus in a natural host, the mallard: experimental infection data. PLoS ONE. 2010; 5(1):e8935. DOI: 10.1371/journal.pone.0008935.</mixed-citation><mixed-citation xml:lang="en">Jourdain E., Gunnarsson G., Wahlgren J., Latorre-Margalef N., Brцjer C., Sahlin S., Svensson L., Waldenstrцm J., Lundkvist A., Olsen B. Influenza virus in a natural host, the mallard: experimental infection data. PLoS ONE. 2010; 5(1):e8935. DOI: 10.1371/journal.pone.0008935.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Runstadler J., Hill N., Hussein I.T.M., Puryear W., Keogh M. Connecting the study of wild influenza with the potential for pandemic disease. Infect. Genet. Evol. 2013; 17:162–87. DOI: 10.1016/j.meegid.2013.02.020.</mixed-citation><mixed-citation xml:lang="en">Runstadler J., Hill N., Hussein I.T.M., Puryear W., Keogh M. Connecting the study of wild influenza with the potential for pandemic disease. Infect. Genet. Evol. 2013; 17:162–87. DOI: 10.1016/j.meegid.2013.02.020.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Lam T.T., Ip H.S., Ghedin E., Wentworth D.E., Halpin R.A., Stockwell T.B., Spiro D.J., Dusek R.J., Bortner J.B., Hoskins J., Bales B.D., Yparraguirre D.R., Holmes E.C. Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds. Ecol. Lett. 2012; 15(1):24–33. DOI: 10.1111/j.1461-0248.2011.01703.x.</mixed-citation><mixed-citation xml:lang="en">Lam T.T., Ip H.S., Ghedin E., Wentworth D.E., Halpin R.A., Stockwell T.B., Spiro D.J., Dusek R.J., Bortner J.B., Hoskins J., Bales B.D., Yparraguirre D.R., Holmes E.C. Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds. Ecol. Lett. 2012; 15(1):24–33. DOI: 10.1111/j.1461-0248.2011.01703.x.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Bahl J., Vijaykrishna D., Holmes E.C., Smith G.J.D., Guan Y. Gene flow and competitive exclusion of avian influenza A virus in natural reservoir hosts. Virology. 2009; 390(2):289–97. DOI: 10.1016/j.virol.2009.05.002.</mixed-citation><mixed-citation xml:lang="en">Bahl J., Vijaykrishna D., Holmes E.C., Smith G.J.D., Guan Y. Gene flow and competitive exclusion of avian influenza A virus in natural reservoir hosts. Virology. 2009; 390(2):289–97. DOI: 10.1016/j.virol.2009.05.002.</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Gonzбlez-Reiche A.S., Morales-Betoulle M.E., Alvarez D., Betoulle J.L., Mьller M.L., Sosa S.M., Perez D.R. Influenza A viruses from wild birds in Guatemala belong to the North American lineage. PLoS ONE. 2012; 7(3):e32873. DOI: 10.1371/journal.pone.0032873.</mixed-citation><mixed-citation xml:lang="en">Gonzбlez-Reiche A.S., Morales-Betoulle M.E., Alvarez D., Betoulle J.L., Mьller M.L., Sosa S.M., Perez D.R. Influenza A viruses from wild birds in Guatemala belong to the North American lineage. PLoS ONE. 2012; 7(3):e32873. DOI: 10.1371/journal.pone.0032873.</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Bahl J., Pham T.T., Hill N.J., Hussein I.T.M., Ma E.J., Easterday B.C., Halpin R.A., Stockwell T.B., Wentworth D.E., Kayali G., Krauss S., Schultz-Cherry S., Webster R.G., Webby R.J., Swartz M.D., Smith G.J.D., Runstadler J.A. Ecosystem interactions underlie the spread of avian influenza A viruses with pandemic potential. PLoS Pathog. 2016; 12(5):e1005620. DOI: 10.1371/journal.ppat.1005620.</mixed-citation><mixed-citation xml:lang="en">Bahl J., Pham T.T., Hill N.J., Hussein I.T.M., Ma E.J., Easterday B.C., Halpin R.A., Stockwell T.B., Wentworth D.E., Kayali G., Krauss S., Schultz-Cherry S., Webster R.G., Webby R.J., Swartz M.D., Smith G.J.D., Runstadler J.A. Ecosystem interactions underlie the spread of avian influenza A viruses with pandemic potential. PLoS Pathog. 2016; 12(5):e1005620. DOI: 10.1371/journal.ppat.1005620.</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Chen H., Smith G.J.D., Li K.S., Wang J., Fan X.H., Rayner J.M., Vijaykrishna D., Zhang J.X., Zhang L.J., Guo C.T., Cheung C.L., Xu K.M., Duan L., Huang K., Qin K., Leung Y.H.C., Wu W.L., Lu H.R., Chen Y., Xia N.S., Naipospos T.S.P., Yuen K.Y., Hassan S.S., Bahri S., Nguyen T.D., Webster R.G., Peiris J.S.M., Guan Y. Establishment of multiple sublineages of H5N1 influenza virus in Asia: implications for pandemic control. Proc. Natl Acad. Sci. USA. 2006; 103(8):2845–50. DOI: 10.1073/pnas.0511120103.</mixed-citation><mixed-citation xml:lang="en">Chen H., Smith G.J.D., Li K.S., Wang J., Fan X.H., Rayner J.M., Vijaykrishna D., Zhang J.X., Zhang L.J., Guo C.T., Cheung C.L., Xu K.M., Duan L., Huang K., Qin K., Leung Y.H.C., Wu W.L., Lu H.R., Chen Y., Xia N.S., Naipospos T.S.P., Yuen K.Y., Hassan S.S., Bahri S., Nguyen T.D., Webster R.G., Peiris J.S.M., Guan Y. Establishment of multiple sublineages of H5N1 influenza virus in Asia: implications for pandemic control. Proc. Natl Acad. Sci. USA. 2006; 103(8):2845–50. DOI: 10.1073/pnas.0511120103.</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Gauthier-Clerc M., Lebarbenchon C., Thomas F. Recent expansion of highly pathogenic avian influenza H5N1: a critical review. Ibis. 2007; 149(2):202–14. DOI: 10.1111/j.1474-919X.2007.00699.x.</mixed-citation><mixed-citation xml:lang="en">Gauthier-Clerc M., Lebarbenchon C., Thomas F. Recent expansion of highly pathogenic avian influenza H5N1: a critical review. Ibis. 2007; 149(2):202–14. DOI: 10.1111/j.1474-919X.2007.00699.x.</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Lu L., Leigh Brown A.J., Lycett S.J. Quantifying predictors for the spatial diffusion of avian influenza virus in China. BMC Evol. Biol. 2017; 17(1):16. DOI: 10.1186/s12862-016-0845-3.</mixed-citation><mixed-citation xml:lang="en">Lu L., Leigh Brown A.J., Lycett S.J. Quantifying predictors for the spatial diffusion of avian influenza virus in China. BMC Evol. Biol. 2017; 17(1):16. DOI: 10.1186/s12862-016-0845-3.</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Kilpatrick A.M., Chmura A.A., Gibbons D.W., Fleischer R.C., Marra P.P., Daszak P. Predicting the global spread of H5N1 avian influenza. Proc. Natl Acad. Sci. USA. 2006; 103(51):19368–73. DOI: 10.1073/pnas.0609227103.</mixed-citation><mixed-citation xml:lang="en">Kilpatrick A.M., Chmura A.A., Gibbons D.W., Fleischer R.C., Marra P.P., Daszak P. Predicting the global spread of H5N1 avian influenza. Proc. Natl Acad. Sci. USA. 2006; 103(51):19368–73. DOI: 10.1073/pnas.0609227103.</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">World Health Organization (WHO). Antigenic and genetic characteristics of zoonotic influenza viruses and candidate vaccine viruses developed for potential use in human vaccines. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/influenza/vaccines/virus/201909_zoonotic_vaccinevirusupdate.pdf?ua=1.</mixed-citation><mixed-citation xml:lang="en">World Health Organization (WHO). Antigenic and genetic characteristics of zoonotic influenza viruses and candidate vaccine viruses developed for potential use in human vaccines. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/influenza/vaccines/virus/201909_zoonotic_vaccinevirusupdate.pdf?ua=1.</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">World Health Organization (WHO). Influenza at the human-animal interface Summary and assessment, 10 April to 10 May 2019. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/influenza/human_animal_interface/Influenza_Summary_IRA_HA_interface_10_05_2019.pdf.</mixed-citation><mixed-citation xml:lang="en">World Health Organization (WHO). Influenza at the human-animal interface Summary and assessment, 10 April to 10 May 2019. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/influenza/human_animal_interface/Influenza_Summary_IRA_HA_interface_10_05_2019.pdf.</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">World organization for animal health (OIE). Update on highly pathogenic avian influenza in animals (type H5 and H7), 2019. (Cited 31 Jan 2020). [Internet]. Available from: http://www.oie.int/en/animal-health-in-the-world/update-on-avian-influenza/2019/.</mixed-citation><mixed-citation xml:lang="en">World organization for animal health (OIE). Update on highly pathogenic avian influenza in animals (type H5 and H7), 2019. (Cited 31 Jan 2020). [Internet]. Available from: http://www.oie.int/en/animal-health-in-the-world/update-on-avian-influenza/2019/.</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Molini U.,Aikukutu G., Roux J.P., Kemper J., Ntahonshikira C., Marruchella G., Khaiseb S., Cattoli G., Dundon W.G. Avian Influenza H5N8 Outbreak in African Penguins (Spheniscus demersus), Namibia, 2019. J. Wildl. Dis. 2020; 56(1):214–8. DOI: 10.7589/2019-03-067.</mixed-citation><mixed-citation xml:lang="en">Molini U.,Aikukutu G., Roux J.P., Kemper J., Ntahonshikira C., Marruchella G., Khaiseb S., Cattoli G., Dundon W.G. Avian Influenza H5N8 Outbreak in African Penguins (Spheniscus demersus), Namibia, 2019. J. Wildl. Dis. 2020; 56(1):214–8. DOI: 10.7589/2019-03-067.</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">European Food Safety Authority, European Centre for Disease Prevention and Control, European Reference Laboratory for Avian Influenza, Adlhoch C., Fusaro A., Kuiken T., Smietanka K., Staubach C., Guajardo M., Baldinelli F. Avian influenza overview August – November 2019. EFSA Journal. 2019; 17(12):e05988. DOI: 10.2903/j.efsa.2019.5988.</mixed-citation><mixed-citation xml:lang="en">European Food Safety Authority, European Centre for Disease Prevention and Control, European Reference Laboratory for Avian Influenza, Adlhoch C., Fusaro A., Kuiken T., Smietanka K., Staubach C., Guajardo M., Baldinelli F. Avian influenza overview August – November 2019. EFSA Journal. 2019; 17(12):e05988. DOI: 10.2903/j.efsa.2019.5988.</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">European Food Safety Authority, European Centre for Disease Prevention and Control, European Reference Laboratory for Avian Influenza, Adlhoch C., Brouwer A., Kuiken T., Miteva A., Mulatti P., Smietanka K., Staubach C., Gogin A., Guajardo M., Baldinelli F. Avian influenza overview November 2018 – February 2019. EFSA Journal. 2019; 17(3):e5664. DOI: 10.2903/j.efsa.2019.5664.</mixed-citation><mixed-citation xml:lang="en">European Food Safety Authority, European Centre for Disease Prevention and Control, European Reference Laboratory for Avian Influenza, Adlhoch C., Brouwer A., Kuiken T., Miteva A., Mulatti P., Smietanka K., Staubach C., Gogin A., Guajardo M., Baldinelli F. Avian influenza overview November 2018 – February 2019. EFSA Journal. 2019; 17(3):e5664. DOI: 10.2903/j.efsa.2019.5664.</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">World Health Organization (WHO). Cumulative number of confirmed human cases of avian influenza A(H5N1) reported to WHO. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/influenza/human_animal_interface/2020_01_20_tableH5N1.pdf?ua=1.</mixed-citation><mixed-citation xml:lang="en">World Health Organization (WHO). Cumulative number of confirmed human cases of avian influenza A(H5N1) reported to WHO. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/influenza/human_animal_interface/2020_01_20_tableH5N1.pdf?ua=1.</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">World Health Organization (WHO), 2019. Influenza at the human-animal interface Summary and assessment, 13 February to 9 April 2019. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/inﬂuenza/human_animal_interface/inﬂuenza_Summary_IRA_HA_interface_09_04_2019.pdf.</mixed-citation><mixed-citation xml:lang="en">World Health Organization (WHO), 2019. Influenza at the human-animal interface Summary and assessment, 13 February to 9 April 2019. (Cited 31 Jan 2020). [Internet]. Available from: https://www.who.int/inﬂuenza/human_animal_interface/inﬂuenza_Summary_IRA_HA_interface_09_04_2019.pdf.</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">World Health Organization (WHO), 2019. Avian Influenza Weekly Update Number 713. WHO, Geneva. 3 pp. (Cited 31 Jan 2020). [Internet]. Available from: https://apps.who.int/iris/bitstream/handle/10665/279855/AI-20191101.pdf?sequence=43&amp;isAllowed=y.</mixed-citation><mixed-citation xml:lang="en">World Health Organization (WHO), 2019. Avian Influenza Weekly Update Number 713. WHO, Geneva. 3 pp. (Cited 31 Jan 2020). [Internet]. Available from: https://apps.who.int/iris/bitstream/handle/10665/279855/AI-20191101.pdf?sequence=43&amp;isAllowed=y.</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Qiu Y., Sun R., Hou G., Yu X., Li Y., Li J., Zhang Q., Zou F., Liu H., Jiang W. Novel reassortant H7N2 originating from the H7N9 highly pathogenic avian influenza viruses in China, 2019. J. Infect. 2019; 79(5):462–70. DOI: 10.1016/j.jinf.2019.08.016.</mixed-citation><mixed-citation xml:lang="en">Qiu Y., Sun R., Hou G., Yu X., Li Y., Li J., Zhang Q., Zou F., Liu H., Jiang W. Novel reassortant H7N2 originating from the H7N9 highly pathogenic avian influenza viruses in China, 2019. J. Infect. 2019; 79(5):462–70. DOI: 10.1016/j.jinf.2019.08.016.</mixed-citation></citation-alternatives></ref><ref id="cit33"><label>33</label><citation-alternatives><mixed-citation xml:lang="ru">Sun H., Lin J., Liu Z., Yu Y., Wu M., Li S., Liu Y., Feng Y., Wu Y., Li M., Jiao P., Luo K., Liao M. Genetic, Molecular, and Pathogenic Characterization of the H9N2 Avian Influenza Viruses Currently Circulating in South China. Viruses. 2019; 11(11):1040. DOI: 10.3390/v11111040.</mixed-citation><mixed-citation xml:lang="en">Sun H., Lin J., Liu Z., Yu Y., Wu M., Li S., Liu Y., Feng Y., Wu Y., Li M., Jiao P., Luo K., Liao M. Genetic, Molecular, and Pathogenic Characterization of the H9N2 Avian Influenza Viruses Currently Circulating in South China. Viruses. 2019; 11(11):1040. DOI: 10.3390/v11111040.</mixed-citation></citation-alternatives></ref><ref id="cit34"><label>34</label><citation-alternatives><mixed-citation xml:lang="ru">Yu Z., Cheng K., Gao Y. Poultry Infection with Influenza Viruses of Wild Bird Origin, China, 2016. Emerg. Infect. Dis. 2018; 24(7):1375–7. DOI: 10.3201/eid2407.171220.</mixed-citation><mixed-citation xml:lang="en">Yu Z., Cheng K., Gao Y. Poultry Infection with Influenza Viruses of Wild Bird Origin, China, 2016. Emerg. Infect. Dis. 2018; 24(7):1375–7. DOI: 10.3201/eid2407.171220.</mixed-citation></citation-alternatives></ref><ref id="cit35"><label>35</label><citation-alternatives><mixed-citation xml:lang="ru">Lycett S.J., Duchatel F., Digard P. A brief history of bird flu. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 2019; 374(1775):20180257. DOI: 10.1098/rstb.2018.0257.</mixed-citation><mixed-citation xml:lang="en">Lycett S.J., Duchatel F., Digard P. A brief history of bird flu. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 2019; 374(1775):20180257. DOI: 10.1098/rstb.2018.0257.</mixed-citation></citation-alternatives></ref><ref id="cit36"><label>36</label><citation-alternatives><mixed-citation xml:lang="ru">World organization for animal health (OIE). Update on highly pathogenic avian influenza in animals (type H5 and H7), 2020. (Cited 31 Jan 2020). [Internet]. Available from: http://www.oie.int/en/animal-health-in-the-world/update-on-avian-influenza/2020/.</mixed-citation><mixed-citation xml:lang="en">World organization for animal health (OIE). Update on highly pathogenic avian influenza in animals (type H5 and H7), 2020. (Cited 31 Jan 2020). [Internet]. Available from: http://www.oie.int/en/animal-health-in-the-world/update-on-avian-influenza/2020/.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
