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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">microbe</journal-id><journal-title-group><journal-title xml:lang="ru">Проблемы особо опасных инфекций</journal-title><trans-title-group xml:lang="en"><trans-title>Problems of Particularly Dangerous Infections</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">0370-1069</issn><issn pub-type="epub">2658-719X</issn><publisher><publisher-name>Russian Research Anti-Plague Institute “Microbe”</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.21055/0370-1069-2023-4-115-124</article-id><article-id custom-type="elpub" pub-id-type="custom">microbe-1905</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ОРИГИНАЛЬНЫЕ СТАТЬИ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>ORIGINAL ARTICLES</subject></subj-group></article-categories><title-group><article-title>Выявление генетических маркеров возбудителей природно-очаговых инфекционных болезней в пробах иксодовых клещей, собранных на территории Гвинейской Республики</article-title><trans-title-group xml:lang="en"><trans-title>Genetic Marker Detection of Natural-Focal Infectious Disease Pathogens in Samples of Ixodidae Ticks, Collected on the Territory of the Republic of Guinea</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-6474-3696</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Найденова</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Naidenova</surname><given-names>E. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>410005, Саратов, ул. Университетская, 46</p></bio><bio xml:lang="en"><p>46, Universitetskaya St., Saratov, 410005</p></bio><email xlink:type="simple">rusrapi@microbe.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-4726-309X</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Захаров</surname><given-names>К. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Zakharov</surname><given-names>K. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>410005, Саратов, ул. Университетская, 46</p></bio><bio xml:lang="en"><p>46, Universitetskaya St., Saratov, 410005</p></bio><email xlink:type="simple">rusrapi@microbe.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-7857-6822</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Карташов</surname><given-names>М. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Kartashov</surname><given-names>M. Yu.</given-names></name></name-alternatives><bio xml:lang="ru"><p>630559, Новосибирская обл., р.п. Кольцово</p></bio><bio xml:lang="en"><p>Kol’tsovo, Novosibirsk Region, 630559</p></bio><email xlink:type="simple">vector@vector.nsc.ru</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Агафонов</surname><given-names>Д. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Agafonov</surname><given-names>D. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>410005, Саратов, ул. Университетская, 46</p></bio><bio xml:lang="en"><p>46, Universitetskaya St., Saratov, 410005</p></bio><email xlink:type="simple">rusrapi@microbe.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-1026-2680</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Сеничкина</surname><given-names>А. М.</given-names></name><name name-style="western" xml:lang="en"><surname>Senichkina</surname><given-names>A. M.</given-names></name></name-alternatives><bio xml:lang="ru"><p>410005, Саратов, ул. Университетская, 46</p></bio><bio xml:lang="en"><p>46, Universitetskaya St., Saratov, 410005</p></bio><email xlink:type="simple">rusrapi@microbe.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-8260-4670</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Катышев</surname><given-names>А. Д.</given-names></name><name name-style="western" xml:lang="en"><surname>Katyshev</surname><given-names>A. D.</given-names></name></name-alternatives><bio xml:lang="ru"><p>410005, Саратов, ул. Университетская, 46</p></bio><bio xml:lang="en"><p>46, Universitetskaya St., Saratov, 410005</p></bio><email xlink:type="simple">rusrapi@microbe.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-4507-4575</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Diallo</surname><given-names>M. A.</given-names></name><name name-style="western" xml:lang="en"><surname>Diallo</surname><given-names>M. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Киндиа</p></bio><bio xml:lang="en"><p>Kindia</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-4565-269X</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Bah</surname><given-names>M. B.</given-names></name><name name-style="western" xml:lang="en"><surname>Bah</surname><given-names>M. B.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Киндиа</p></bio><bio xml:lang="en"><p>Kindia</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-4506-6033</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Boumbaly</surname><given-names>S.</given-names></name><name name-style="western" xml:lang="en"><surname>Boumbaly</surname><given-names>S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Киндиа;</p><p>Конакри</p></bio><bio xml:lang="en"><p>Kindia;</p><p>Conakry</p></bio><xref ref-type="aff" rid="aff-4"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-3788-3452</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Кутырев</surname><given-names>В. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Kutyrev</surname><given-names>V. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>410005, Саратов, ул. Университетская, 46</p></bio><bio xml:lang="en"><p>46, Universitetskaya St., Saratov, 410005</p></bio><email xlink:type="simple">rusrapi@microbe.ru</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">ФКУН «Российский научно-исследовательский противочумный институт «Микроб»<country>Россия</country></aff><aff xml:lang="en">Russian Research Anti-Plague Institute “Microbe”<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">ФБУН «Государственный научный центр вирусологии и биотехнологии «Вектор»<country>Россия</country></aff><aff xml:lang="en">State Scientific Center of Virology and Biotechnology “Vector”<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru">Исследовательский институт прикладной биологии Гвинеи<country>Гвинея</country></aff><aff xml:lang="en">Research Institute of Applied Biology of Guinea<country>Guinea</country></aff></aff-alternatives><aff-alternatives id="aff-4"><aff xml:lang="ru">Исследовательский институт прикладной биологии Гвинеи;&#13;
Исследовательский центр вирусологии, Лаборатория вирусных геморрагических лихорадок Гвинеи<country>Гвинея</country></aff><aff xml:lang="en">Research Institute of Applied Biology of Guinea;&#13;
Virology Research Center, Laboratory of Viral Hemorrhagic Fevers of Guinea<country>Guinea</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2023</year></pub-date><pub-date pub-type="epub"><day>10</day><month>01</month><year>2024</year></pub-date><volume>0</volume><issue>4</issue><fpage>115</fpage><lpage>124</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Найденова Е.В., Захаров К.С., Карташов М.Ю., Агафонов Д.А., Сеничкина А.М., Катышев А.Д., Diallo M.A., Bah M.B., Boumbaly S., Кутырев В.В., 2024</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="ru">Найденова Е.В., Захаров К.С., Карташов М.Ю., Агафонов Д.А., Сеничкина А.М., Катышев А.Д., Diallo M.A., Bah M.B., Boumbaly S., Кутырев В.В.</copyright-holder><copyright-holder xml:lang="en">Naidenova E.V., Zakharov K.S., Kartashov M.Y., Agafonov D.A., Senichkina A.M., Katyshev A.D., Diallo M.A., Bah M.B., Boumbaly S., Kutyrev V.V.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://journal.microbe.ru/jour/article/view/1905">https://journal.microbe.ru/jour/article/view/1905</self-uri><abstract><p>В разные периоды в Западной Африке выявлена циркуляция достаточно широкого спектра возбудителей природно-очаговых инфекционных болезней, передающихся клещами: боррелии, риккетсии, коксиеллы, вирусы Крымской-Конго геморрагической лихорадки (ККГЛ), Бханджа, синего языка овец Найроби и др. В настоящее время эпидемиологическая и эпизоотологическая ситуация по природно-очаговым инфекционным болезням, складывающаяся на территории Гвинейской Республики, выяснена не до конца.</p><p>Цель работы – выявление генетических маркеров (РНК/ДНК) возбудителей природно-очаговых инфекционных болезней в пробах иксодовых клещей, собранных в Гвинейской Республике, и определение спектра патогенов, циркулирующих на территории различных ландшафтно-географических зон страны.</p><sec><title>Материалы и методы</title><p>Материалы и методы. Для проведения исследований на территории всех ландшафтно-географических зон Гвинейской Республики были собраны 4695 экземпляров иксодовых клещей 11 видов. С учетом видовой принадлежности, пола, фазы развития, а также места сбора составлена панель из 1645 проб. Методами полимеразной цепной реакции (ПЦР) и полимеразной цепной реакции с обратной транскрипцией (ОТ-ПЦР) проведена детекция генетических маркеров вирусов Крымской-Конго геморрагической лихорадки и клещевого энцефалита, а также Borrelia burgdorferi s.l., Ehrlichia chaffeensis, Ehrlichia muris, Anaplasma phagocytophilum, Coxiella burnetii, риккетсий группы клещевой пятнистой лихорадки (КПЛ) и Francisella tularensis.</p></sec><sec><title>Результаты и обсуждение</title><p>Результаты и обсуждение. В результате в суспензиях иксодовых клещей обнаружены: ДНК риккетсий группы КПЛ (25,6 % от всех исследуемых образцов), ДНК C. burnetii (6,2 %), кДНК B. burgdorferi s.l. (9,1 %) и РНК вируса ККГЛ (2,5 %). Перечисленный спектр возбудителей зарегистрирован во всех ландшафтно-географических зонах Гвинеи. Генетические маркеры возбудителей туляремии, анаплазмозов, эрлихиозов и клещевого энцефалита в настоящем исследовании не выявлены. Полученные результаты позволили уточнить возможный спектр болезней, передаваемых клещами, на территории Гвинейской Республики, определили необходимость дальнейшего изучения циркуляции возбудителей природно-очаговых инфекционных болезней в Западной Африке и проведения регулярного эпизоотологического мониторинга.</p></sec></abstract><trans-abstract xml:lang="en"><p>The circulation of a rather wide range of pathogens of natural-focal infectious diseases transmitted by ticks was detected in West Africa at different points of time: Borrelia, Rickettsia, Coxiella, Crimean-Congo hemorrhagic fever (CCHF), Bhanja, and bluetongue viruses, etc. Current epidemiological and epizootiological situation on natural-focal infectious diseases on the territory of the Republic of Guinea is not entirely clarified.</p><p>The aim of this work was to identify genetic markers (RNA/DNA) of natural-focal infectious disease agents in samples of Ixodidae ticks collected in the Republic of Guinea, and to determine the spectrum of pathogens circulating in various landscape-geographical zones of the country.</p><sec><title>Materials and methods</title><p>Materials and methods. To conduct research on the territory of all landscape-geographical zones of the Republic of Guinea, 4695 specimens of Ixodidae ticks of 11 species were collected. Taking into account the species appurtenance, gender, phase of development, as well as the site of collection, a panel of 1645 samples was compiled. Genetic markers of Crimean-Congo hemorrhagic fever and tick-borne encephalitis viruses, as well as Borrelia burgdorferi s.l., Ehrlichia chaffeensis, Ehrlichia muris, Anaplasma phagocytophilum, Coxiella burnetii, Rickettsia of the tick-borne spotted fever (TBSF) group, and Francisella tularensis were detected using polymerase chain reaction (PCR) and reverse transcription polymerase chain reaction (RT-PCR).</p></sec><sec><title>Results and discussion</title><p>Results and discussion. The following markers of natural-focal disease agents were found in the Ixodidae tick suspensions: DNA of Rickettsia of the TBSF group (25.6 % of all samples studied), DNA of C. burnetii (6.2 %), cDNA of B. burgdorferi s.l. (9.1 %), and RNA of the CCHF virus (2.5 %). The listed spectrum of pathogens has been registered in all landscape-geographical zones of Guinea. Genetic markers of tularemia, anaplasmosis, ehrlichiosis and tick-borne encephalitis pathogens have not been identified in this study. The results obtained made it possible to clarify the probable spectrum of tick-borne diseases in the territory of the Republic of Guinea, determined the need for further study of the circulation of natural-focal infectious disease agents in West Africa and conducting regular epizootiological monitoring.</p></sec></trans-abstract><kwd-group xml:lang="ru"><kwd>иксодовые клещи</kwd><kwd>Гвинейская Республика</kwd><kwd>генетические маркеры</kwd><kwd>природно-очаговые инфекционные болезни</kwd><kwd>ПЦР</kwd><kwd>ОТ-ПЦР</kwd></kwd-group><kwd-group xml:lang="en"><kwd>Ixodidae ticks</kwd><kwd>Republic of Guinea</kwd><kwd>genetic markers</kwd><kwd>natural-focal infectious diseases</kwd><kwd>PCR</kwd><kwd>RT-PCR</kwd></kwd-group><funding-group xml:lang="ru"><funding-statement>Исследования проводились в рамках распоряжений Правительства Российской Федерации от 22 декабря 2017 г. № 2904-р и от 14 ноября 2020 г. № 2985-р о российско-гвинейском научно-техническом сотрудничестве в области эпидемиологии, профилактики и мониторинга бактериальных и вирусных инфекций в Гвинейской Республике.</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">WHO. 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