Results of Detecting SARS-CoV-2 and Other Pathogens of Community-Acquired Pneumonia by PCR in the Tyumen Region
I. V. Bakshtanovskaya,
T. F. Stepanova,
G. V. Sharukho,
A. N. Letyushev,
K. B. Stepanova,
N. V. Loginova,
Ts. A. Panina,
E. A. Zmatrakova,
A. N. Kosyreva,
A. Z. Bartusevich,
S. A. Leont’eva,
A. O. Vishnyakova https://doi.org/10.21055/0370-1069-2020-3-146-149
Abstract
The aim of this work was to identify the causative agent of community-acquired pneumonia and coinfection using PCR study of biomaterial from patients.
Materials and methods. PCR testing of 268 samples from 258 patients was carried out to identify RNA/DNA of viral and bacterial pathogens of respiratory infections.
Results and discussion. In 43.3 % of samples SARS-CoV-2 RNA was detected, in 4.5 % – RNA/DNA of acute respiratory viral infections pathogens, in one sample – DNA of Mycoplasma pneumoniae. Co-infection was detected only in patients of the anti-tuberculosis dispensary (SARS-CoV-2 and Mycobacterium tuberculosis). In the examined patients with pneumonia, SARS-CoV-2 RNA was significantly more often detected in biomaterial from the lower respiratory tract (52 %) than in respiratory smears (8.5 %). In the first week from the onset of the disease, 19.2 % of positive samples were found, in the second – 56.5 %.
About the Authors
I. V. Bakshtanovskaya
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
T. F. Stepanova
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
G. V. Sharukho
Rospotrebnadzor Administration in the Tyumen Region
Russian Federation
Russian Federation
A. N. Letyushev
Tyumen Research Institute of the Regional Infection Pathology;
Rospotrebnadzor Administration in the Tyumen Region
Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
45-A, Rizhskaya St., Tyumen, 625026, Russian Federation
K. B. Stepanova
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
N. V. Loginova
Department of Health of the Tyumen Region
Russian Federation
Tyumen
Russian Federation
Tyumen
Ts. A. Panina
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
E. A. Zmatrakova
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
A. N. Kosyreva
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
A. Z. Bartusevich
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
S. A. Leont’eva
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
A. O. Vishnyakova
Tyumen Research Institute of the Regional Infection Pathology
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
Russian Federation
147, Resbubliki St., Tyumen, 625026, Russian Federation
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Review
For citations:
Bakshtanovskaya I.V., Stepanova T.F., Sharukho G.V., Letyushev A.N., Stepanova K.B., Loginova N.V., Panina Ts.A., Zmatrakova E.A., Kosyreva A.N., Bartusevich A.Z., Leont’eva S.A., Vishnyakova A.O. Results of Detecting SARS-CoV-2 and Other Pathogens of Community-Acquired Pneumonia by PCR in the Tyumen Region. Problems of Particularly Dangerous Infections. 2020;(3):146-149. (In Russ.) https://doi.org/10.21055/0370-1069-2020-3-146-149
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