Preview

Problems of Particularly Dangerous Infections

Advanced search

Experience in Genome Analysis Use in SAET Mobile Complex Facilities

https://doi.org/10.21055/0370-1069-2014-2-113-114

Abstract

Described is the first-ever experience in genome analysis use in SAET mobile complex facilities, obtained during the XXVII World-wide Summer Universiade in Kazan, 2013. Carried out was 16S rRNA sequencing of Salmonella enteric strain isolated from an infected. For that matter, employed was “MicroSEQ 500 16S rDNA Bacterial Identification Kits” (Applied Biosystems, USA), which allows for sequencing of DNA fragments (500 bp) of 16S rRNA gene in the bacteria under investigation.

About the Authors

E. V. Naidenova
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


S. A. Portenko
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


E. S. Kazakova
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


I. G. Karnaukhov
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


A. V. Cherkasov
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


S. A. Shcherbakova
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


V. V. Kutyrev
Russian Research Anti-Plague Institute “Microbe”
Russian Federation


References

1. Baddam R., Thong K.L., Avasthi T.S., Shaik S., Yap K.P., Teh C.S., Chai L.C., Kumar N., Ahmed N. Whole-genome sequences and comparative genomics of Salmonella enterica serovar Typhi isolates from patients with fatal and nonfatal typhoid fever in Papua New Guinea. J. Bacteriol. 2012; 194:5122–3.

2. Guibourdenche M., Roggentin P., Mikoleit M., Fields P.I., Bockemühl J., Grimont P.A.D., Weill F.-X. Supplement 2003–2007 (No. 47) to the White-Kauffmann-Le Minor scheme. Res. Microbiol. 2010; 161:26–9.

3. Hellberg R.S., Haney C.J., Shen Y., Cheng C.M., Williams-Hill D.M., Martin W.B. Development of a custom 16S rRNA gene library for the identification and molecular subtyping of Salmonella enterica. J. Microbiol. Methods. 2012; 91(3):448–58.

4. Hendriksen R.S. A global Salmonella surveillance and laboratory support project of the World Health Organization. 4th Ed. April 2003.


Review

For citations:


Naidenova E.V., Portenko S.A., Kazakova E.S., Karnaukhov I.G., Cherkasov A.V., Shcherbakova S.A., Kutyrev V.V. Experience in Genome Analysis Use in SAET Mobile Complex Facilities. Problems of Particularly Dangerous Infections. 2014;(2):113-114. (In Russ.) https://doi.org/10.21055/0370-1069-2014-2-113-114

Views: 572


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 0370-1069 (Print)
ISSN 2658-719X (Online)